Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gm14130-201ENSMUST00000118417 987 ntBASIC16.92■□□□□ 0.3
Col15a1O35206 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC16.92■□□□□ 0.3
Col15a1O35206 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.92■□□□□ 0.3
Col15a1O35206 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Gm22058-201ENSMUST00000083393 310 ntBASIC16.92■□□□□ 0.3
Col15a1O35206 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.92■□□□□ 0.3
Col15a1O35206 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.92■□□□□ 0.3
Col15a1O35206 Gm37827-201ENSMUST00000194486 1542 ntBASIC16.92■□□□□ 0.3
Col15a1O35206 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Col15a1O35206 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col15a1O35206 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Col15a1O35206 Gm12217-201ENSMUST00000118858 696 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Col15a1O35206 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.91■□□□□ 0.3
Col15a1O35206 Gm8712-201ENSMUST00000221090 701 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 AC113031.8-201ENSMUST00000227856 631 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col15a1O35206 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Col15a1O35206 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Gm3287-205ENSMUST00000228893 1332 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col15a1O35206 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col15a1O35206 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.91■□□□□ 0.3
Col15a1O35206 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Col15a1O35206 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC16.9■□□□□ 0.3
Col15a1O35206 Gm25043-201ENSMUST00000158604 212 ntBASIC16.9■□□□□ 0.3
Col15a1O35206 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC16.9■□□□□ 0.3
Col15a1O35206 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC16.9■□□□□ 0.3
Col15a1O35206 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC16.9■□□□□ 0.3
Col15a1O35206 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.9■□□□□ 0.3
Col15a1O35206 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.9■□□□□ 0.3
Col15a1O35206 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC16.9■□□□□ 0.3
Col15a1O35206 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.9■□□□□ 0.3
Col15a1O35206 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col15a1O35206 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.9■□□□□ 0.3
Col15a1O35206 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col15a1O35206 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col15a1O35206 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col15a1O35206 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Col15a1O35206 Gm13665-201ENSMUST00000120830 528 ntBASIC16.89■□□□□ 0.3
Col15a1O35206 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC16.89■□□□□ 0.3
Col15a1O35206 Gm25732-201ENSMUST00000175168 60 ntBASIC16.89■□□□□ 0.3
Col15a1O35206 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Col15a1O35206 Mir7221-201ENSMUST00000184009 72 ntBASIC16.89■□□□□ 0.3
Col15a1O35206 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Col15a1O35206 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms