Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Ebf3O08791 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.89□□□□□ -0.19
Ebf3O08791 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ebf3O08791 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.88□□□□□ -0.19
Ebf3O08791 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Gm27331-201ENSMUST00000183705 60 ntBASIC13.88□□□□□ -0.19
Ebf3O08791 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Ebf3O08791 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.88□□□□□ -0.19
Ebf3O08791 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ebf3O08791 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ebf3O08791 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm8584-201ENSMUST00000171982 758 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Gm27514-201ENSMUST00000183692 110 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Gm29705-201ENSMUST00000212598 474 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Itm2b-204ENSMUST00000228637 783 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm7399-201ENSMUST00000032395 858 ntBASIC13.87□□□□□ -0.19
Ebf3O08791 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ebf3O08791 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ebf3O08791 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ebf3O08791 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Ebf3O08791 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ebf3O08791 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.86□□□□□ -0.19
Ebf3O08791 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ebf3O08791 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms