Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdha9Q91Y11 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm15806-201ENSMUST00000120696 955 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha9Q91Y11 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha9Q91Y11 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm13612-201ENSMUST00000119276 390 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.2□□□□□ -0.14
Pcdha9Q91Y11 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha9Q91Y11 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms