Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.97□□□□□ -0.65
Trim63Q38HM4 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim63Q38HM4 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm12527-201ENSMUST00000117967 564 ntBASIC10.96□□□□□ -0.65
Trim63Q38HM4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.96□□□□□ -0.65
Trim63Q38HM4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm2274-201ENSMUST00000184539 609 ntBASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trim63Q38HM4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trim63Q38HM4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trim63Q38HM4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms