Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 U82695.1-201ENST00000635752 1889 ntBASIC18.05■□□□□ 0.48
HTTP42858 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HTTP42858 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 NKAIN1P1-201ENST00000435754 582 ntBASIC18.05■□□□□ 0.48
HTTP42858 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.05■□□□□ 0.48
HTTP42858 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
HTTP42858 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.05■□□□□ 0.48
HTTP42858 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HTTP42858 AC104596.2-201ENST00000512793 793 ntBASIC18.05■□□□□ 0.48
HTTP42858 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HTTP42858 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 AC005077.2-201ENST00000449786 690 ntBASIC18.04■□□□□ 0.48
HTTP42858 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HTTP42858 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HTTP42858 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HTTP42858 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.04■□□□□ 0.48
HTTP42858 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC18.04■□□□□ 0.48
HTTP42858 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.04■□□□□ 0.48
HTTP42858 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.04■□□□□ 0.48
HTTP42858 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.04■□□□□ 0.48
HTTP42858 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.04■□□□□ 0.48
HTTP42858 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HTTP42858 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.04■□□□□ 0.48
HTTP42858 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.03■□□□□ 0.48
HTTP42858 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.03■□□□□ 0.48
HTTP42858 AC104982.3-201ENST00000581995 514 ntBASIC18.03■□□□□ 0.48
HTTP42858 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 NDUFV2P1-201ENST00000596415 907 ntBASIC18.03■□□□□ 0.48
HTTP42858 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
HTTP42858 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.03■□□□□ 0.48
HTTP42858 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.03■□□□□ 0.48
HTTP42858 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
HTTP42858 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HTTP42858 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 FTLP10-202ENST00000505798 471 ntBASIC18.03■□□□□ 0.48
HTTP42858 MBP-227ENST00000526111 581 ntTSL 4 BASIC18.03■□□□□ 0.48
HTTP42858 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
HTTP42858 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.03■□□□□ 0.48
HTTP42858 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.03■□□□□ 0.48
HTTP42858 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms