Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm14719-201ENSMUST00000121891 340 ntBASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm21854-201ENSMUST00000179901 471 ntBASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Syt7-204ENSMUST00000223586 1344 ntBASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm28386-201ENSMUST00000189147 1849 ntBASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav9n-2A0A0G2JDP3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms