Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC092337.1-201ENST00000568699 1129 ntBASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL9Q8NET4 MIR6069-201ENST00000620069 79 ntBASIC20.06■□□□□ 0.8
RTL9Q8NET4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL9Q8NET4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AL136982.4-201ENST00000437689 1740 ntBASIC20.05■□□□□ 0.8
RTL9Q8NET4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AL592424.1-201ENST00000563624 1536 ntBASIC20.05■□□□□ 0.8
RTL9Q8NET4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 HILS1-202ENST00000545329 423 ntBASIC20.05■□□□□ 0.8
RTL9Q8NET4 WASH4P-201ENST00000564273 1246 ntBASIC20.05■□□□□ 0.8
RTL9Q8NET4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL9Q8NET4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL9Q8NET4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 DGCR5-201ENST00000399539 862 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 FO393414.2-201ENST00000405153 598 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 DOC2GP-202ENST00000514950 1163 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 AC025048.3-201ENST00000590609 569 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 SRD5A3P1-201ENST00000603021 949 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 AC099568.2-201ENST00000609194 695 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 AC005702.4-201ENST00000618393 416 ntBASIC20.04■□□□□ 0.8
RTL9Q8NET4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL9Q8NET4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL9Q8NET4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 IGHV3-71-201ENST00000523324 359 ntBASIC20.03■□□□□ 0.8
RTL9Q8NET4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 AC004461.2-201ENST00000629517 803 ntBASIC20.03■□□□□ 0.8
RTL9Q8NET4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 FZD10-202ENST00000539839 3282 ntBASIC20.03■□□□□ 0.8
RTL9Q8NET4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RTL9Q8NET4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.03■□□□□ 0.8
RTL9Q8NET4 SLC7A15P-201ENST00000424028 1363 ntBASIC20.03■□□□□ 0.8
RTL9Q8NET4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC20.02■□□□□ 0.8
RTL9Q8NET4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL9Q8NET4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms