Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 BOLA2P3-201ENST00000404566 256 ntBASIC11.23□□□□□ -0.61
CSMD3Q7Z407 HINT2P1-201ENST00000419438 481 ntBASIC11.23□□□□□ -0.61
CSMD3Q7Z407 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CSMD3Q7Z407 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 MIR326-201ENST00000362220 95 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TSACC-208ENST00000481479 741 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TDH-203ENST00000531764 1110 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 LINC01115-203ENST00000606068 577 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 CYP4F24P-201ENST00000586049 1580 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC036164.1-201ENST00000570544 333 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 CLUHP6-201ENST00000580789 941 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC026979.3-201ENST00000607315 403 ntBASIC11.22□□□□□ -0.61
CSMD3Q7Z407 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CSMD3Q7Z407 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 RPL13P2-201ENST00000440687 659 ntBASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AC018735.1-201ENST00000437208 1502 ntBASIC11.21□□□□□ -0.61
CSMD3Q7Z407 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC11.21□□□□□ -0.61
CSMD3Q7Z407 BRI3BPP1-201ENST00000594224 787 ntBASIC11.21□□□□□ -0.61
CSMD3Q7Z407 SPCS2P2-201ENST00000603270 608 ntBASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms