Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd4Q6PDQ2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm8908-201ENSMUST00000121633 1024 ntBASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm25700-201ENSMUST00000177693 110 ntBASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd4Q6PDQ2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm16296-201ENSMUST00000159905 325 ntBASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm44967-201ENSMUST00000207047 631 ntBASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd4Q6PDQ2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd4Q6PDQ2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd4Q6PDQ2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm12217-201ENSMUST00000118858 696 ntBASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm8018-201ENSMUST00000173536 789 ntBASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Chd4Q6PDQ2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms