Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Gm18049-201ENSMUST00000208909 581 ntBASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cnga4Q3UW12 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.58□□□□□ -0.23
Cnga4Q3UW12 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gm13015-201ENSMUST00000118674 204 ntBASIC13.58□□□□□ -0.24
Cnga4Q3UW12 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cnga4Q3UW12 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Gm6916-202ENSMUST00000205523 195 ntBASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Gm45612-201ENSMUST00000211320 160 ntBASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Cnga4Q3UW12 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms