Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NcanP55066 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.01□□□□□ -0.17
NcanP55066 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Gm24749-201ENSMUST00000157838 343 ntBASIC14.01□□□□□ -0.17
NcanP55066 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.01□□□□□ -0.17
NcanP55066 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.01□□□□□ -0.17
NcanP55066 Gm19640-201ENSMUST00000214849 464 ntBASIC14.01□□□□□ -0.17
NcanP55066 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.01□□□□□ -0.17
NcanP55066 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.01□□□□□ -0.17
NcanP55066 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC14.01□□□□□ -0.17
NcanP55066 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.01□□□□□ -0.17
NcanP55066 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.01□□□□□ -0.17
NcanP55066 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
NcanP55066 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NcanP55066 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.01□□□□□ -0.17
NcanP55066 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NcanP55066 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NcanP55066 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NcanP55066 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NcanP55066 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14□□□□□ -0.17
NcanP55066 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14□□□□□ -0.17
NcanP55066 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NcanP55066 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14□□□□□ -0.17
NcanP55066 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14□□□□□ -0.17
NcanP55066 Gm7666-201ENSMUST00000146631 819 ntBASIC14□□□□□ -0.17
NcanP55066 Gm25043-201ENSMUST00000158604 212 ntBASIC14□□□□□ -0.17
NcanP55066 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NcanP55066 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14□□□□□ -0.17
NcanP55066 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14□□□□□ -0.17
NcanP55066 AC163667.3-201ENSMUST00000225774 222 ntBASIC14□□□□□ -0.17
NcanP55066 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NcanP55066 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14□□□□□ -0.17
NcanP55066 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
NcanP55066 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Gm44645-201ENSMUST00000205492 1653 ntBASIC14□□□□□ -0.17
NcanP55066 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NcanP55066 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Gm9768-201ENSMUST00000206007 2861 ntBASIC14□□□□□ -0.17
NcanP55066 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14□□□□□ -0.17
NcanP55066 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NcanP55066 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
NcanP55066 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
NcanP55066 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NcanP55066 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.99□□□□□ -0.17
NcanP55066 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Gm12948-201ENSMUST00000119406 682 ntBASIC13.99□□□□□ -0.17
NcanP55066 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NcanP55066 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms