Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.53■□□□□ 0.24
GPC4O75487 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
GPC4O75487 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.53■□□□□ 0.24
GPC4O75487 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GPC4O75487 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 ZNF259P1-201ENST00000407656 1365 ntBASIC16.52■□□□□ 0.24
GPC4O75487 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
GPC4O75487 AC096734.2-201ENST00000562054 433 ntBASIC16.52■□□□□ 0.24
GPC4O75487 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 AL139011.1-202ENST00000642063 584 ntBASIC16.52■□□□□ 0.24
GPC4O75487 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GPC4O75487 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.52■□□□□ 0.24
GPC4O75487 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.52■□□□□ 0.23
GPC4O75487 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
GPC4O75487 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.52■□□□□ 0.23
GPC4O75487 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.52■□□□□ 0.23
GPC4O75487 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GPC4O75487 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GPC4O75487 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GPC4O75487 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 RHOQP3-201ENST00000437982 621 ntBASIC16.51■□□□□ 0.23
GPC4O75487 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.51■□□□□ 0.23
GPC4O75487 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.51■□□□□ 0.23
GPC4O75487 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.51■□□□□ 0.23
GPC4O75487 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 HYMAI-201ENST00000635591 3347 ntBASIC16.51■□□□□ 0.23
GPC4O75487 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.51■□□□□ 0.23
GPC4O75487 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GPC4O75487 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
GPC4O75487 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms