Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.22□□□□□ -0.61
Pfdn2O70591 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.22□□□□□ -0.61
Pfdn2O70591 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pfdn2O70591 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.22□□□□□ -0.61
Pfdn2O70591 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.21□□□□□ -0.61
Pfdn2O70591 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Pfdn2O70591 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Pfdn2O70591 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.21□□□□□ -0.61
Pfdn2O70591 Mzt1-203ENSMUST00000227948 952 ntBASIC11.21□□□□□ -0.61
Pfdn2O70591 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Pfdn2O70591 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Pfdn2O70591 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.21□□□□□ -0.62
Pfdn2O70591 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.21□□□□□ -0.62
Pfdn2O70591 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Pfdn2O70591 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.2□□□□□ -0.62
Pfdn2O70591 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pfdn2O70591 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.2□□□□□ -0.62
Pfdn2O70591 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.2□□□□□ -0.62
Pfdn2O70591 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.2□□□□□ -0.62
Pfdn2O70591 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms