Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdh17Q9R100 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Mir7221-201ENSMUST00000184009 72 ntBASIC13.1□□□□□ -0.31
Cdh17Q9R100 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.1□□□□□ -0.31
Cdh17Q9R100 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cdh17Q9R100 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh17Q9R100 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh17Q9R100 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.08□□□□□ -0.31
Cdh17Q9R100 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cdh17Q9R100 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cdh17Q9R100 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.08□□□□□ -0.32
Cdh17Q9R100 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Gm24447-201ENSMUST00000083977 338 ntBASIC13.08□□□□□ -0.32
Cdh17Q9R100 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.08□□□□□ -0.32
Cdh17Q9R100 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh17Q9R100 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms