Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn1Q8K0T0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Rtn1Q8K0T0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rtn1Q8K0T0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Gm15371-201ENSMUST00000117057 784 ntBASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Gm15429-201ENSMUST00000151268 798 ntBASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Gm6983-201ENSMUST00000214912 628 ntBASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rtn1Q8K0T0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Gm26315-201ENSMUST00000083890 321 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rtn1Q8K0T0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm12106-201ENSMUST00000116006 1200 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm14716-201ENSMUST00000120138 718 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm6745-201ENSMUST00000199216 526 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rtn1Q8K0T0 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms