Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Gm12928-201ENSMUST00000117115 573 ntBASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ccdc60Q8C4J0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm43134-201ENSMUST00000199434 1886 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.11■□□□□ 0.33
Ccdc60Q8C4J0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ccdc60Q8C4J0 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccdc60Q8C4J0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms