Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.89□□□□□ -0.19
Trim62Q80V85 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim62Q80V85 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.88□□□□□ -0.19
Trim62Q80V85 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trim62Q80V85 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim62Q80V85 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.87□□□□□ -0.19
Trim62Q80V85 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm27486-201ENSMUST00000184923 80 ntBASIC13.87□□□□□ -0.19
Trim62Q80V85 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.87□□□□□ -0.19
Trim62Q80V85 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim62Q80V85 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.87□□□□□ -0.19
Trim62Q80V85 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim62Q80V85 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Trim62Q80V85 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.86□□□□□ -0.19
Trim62Q80V85 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trim62Q80V85 Gm11814-201ENSMUST00000119515 929 ntBASIC13.86□□□□□ -0.19
Trim62Q80V85 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim62Q80V85 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim62Q80V85 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim62Q80V85 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms