Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.87□□□□□ -0.19
Smad1P70340 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.87□□□□□ -0.19
Smad1P70340 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smad1P70340 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Smad1P70340 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.87□□□□□ -0.19
Smad1P70340 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.87□□□□□ -0.19
Smad1P70340 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.87□□□□□ -0.19
Smad1P70340 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smad1P70340 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.87□□□□□ -0.19
Smad1P70340 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smad1P70340 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smad1P70340 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.86□□□□□ -0.19
Smad1P70340 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smad1P70340 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Smad1P70340 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.86□□□□□ -0.19
Smad1P70340 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.86□□□□□ -0.19
Smad1P70340 Gm9522-201ENSMUST00000182394 926 ntBASIC13.86□□□□□ -0.19
Smad1P70340 Gm33320-201ENSMUST00000192232 530 ntBASIC13.86□□□□□ -0.19
Smad1P70340 Gm6266-201ENSMUST00000203844 806 ntBASIC13.86□□□□□ -0.19
Smad1P70340 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Smad1P70340 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smad1P70340 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smad1P70340 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smad1P70340 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smad1P70340 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Smad1P70340 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smad1P70340 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.85□□□□□ -0.19
Smad1P70340 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.85□□□□□ -0.19
Smad1P70340 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.85□□□□□ -0.19
Smad1P70340 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smad1P70340 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Smad1P70340 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Smad1P70340 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smad1P70340 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms