Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S2P56377 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S2P56377 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S2P56377 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.02■□□□□ 0.16
AP1S2P56377 AL022342.1-201ENST00000400363 863 ntBASIC16.02■□□□□ 0.16
AP1S2P56377 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S2P56377 AC093724.1-201ENST00000448659 1027 ntBASIC16.02■□□□□ 0.16
AP1S2P56377 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.02■□□□□ 0.16
AP1S2P56377 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S2P56377 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.02■□□□□ 0.16
AP1S2P56377 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
AP1S2P56377 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
AP1S2P56377 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
AP1S2P56377 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.02■□□□□ 0.15
AP1S2P56377 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.02■□□□□ 0.15
AP1S2P56377 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
AP1S2P56377 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
AP1S2P56377 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.02■□□□□ 0.15
AP1S2P56377 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
AP1S2P56377 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S2P56377 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 PCDH8P1-201ENST00000428983 2773 ntBASIC16.01■□□□□ 0.15
AP1S2P56377 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S2P56377 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 AC002347.1-201ENST00000569543 541 ntBASIC16.01■□□□□ 0.15
AP1S2P56377 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.01■□□□□ 0.15
AP1S2P56377 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.01■□□□□ 0.15
AP1S2P56377 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
AP1S2P56377 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
AP1S2P56377 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
AP1S2P56377 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16■□□□□ 0.15
AP1S2P56377 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 MIR574-201ENST00000385209 96 ntBASIC16■□□□□ 0.15
AP1S2P56377 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16■□□□□ 0.15
AP1S2P56377 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16■□□□□ 0.15
AP1S2P56377 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16■□□□□ 0.15
AP1S2P56377 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
AP1S2P56377 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16■□□□□ 0.15
AP1S2P56377 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms