Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.33□□□□□ -0.12
Mmp3P28862 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Mmp3P28862 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp3P28862 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.32□□□□□ -0.12
Mmp3P28862 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.32□□□□□ -0.12
Mmp3P28862 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Gm43118-201ENSMUST00000199149 775 ntBASIC14.32□□□□□ -0.12
Mmp3P28862 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.32□□□□□ -0.12
Mmp3P28862 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.32□□□□□ -0.12
Mmp3P28862 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.32□□□□□ -0.12
Mmp3P28862 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp3P28862 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp3P28862 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Mmp3P28862 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp3P28862 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Mmp3P28862 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Mmp3P28862 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Mmp3P28862 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.31□□□□□ -0.12
Mmp3P28862 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.31□□□□□ -0.12
Mmp3P28862 Gm25261-201ENSMUST00000157416 134 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.31□□□□□ -0.12
Mmp3P28862 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Mmp3P28862 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.31□□□□□ -0.12
Mmp3P28862 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.31□□□□□ -0.12
Mmp3P28862 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Mmp3P28862 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp3P28862 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp3P28862 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mmp3P28862 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.3□□□□□ -0.12
Mmp3P28862 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.3□□□□□ -0.12
Mmp3P28862 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.3□□□□□ -0.12
Mmp3P28862 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.3□□□□□ -0.12
Mmp3P28862 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.3□□□□□ -0.12
Mmp3P28862 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp3P28862 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms