Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.81□□□□□ -0.2
Atf6F6VAN0 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.81□□□□□ -0.2
Atf6F6VAN0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Atf6F6VAN0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Atf6F6VAN0 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.8□□□□□ -0.2
Atf6F6VAN0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gm15376-201ENSMUST00000122258 783 ntBASIC13.8□□□□□ -0.2
Atf6F6VAN0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.8□□□□□ -0.2
Atf6F6VAN0 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.8□□□□□ -0.2
Atf6F6VAN0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.8□□□□□ -0.2
Atf6F6VAN0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm44855-201ENSMUST00000205725 362 ntBASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm7730-201ENSMUST00000212486 454 ntBASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm17330-201ENSMUST00000221047 165 ntBASIC13.79□□□□□ -0.2
Atf6F6VAN0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.79□□□□□ -0.2
Atf6F6VAN0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Atf6F6VAN0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms