Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap4s1Q9WVL1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap4s1Q9WVL1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ap4s1Q9WVL1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.51■□□□□ 0.87
Ap4s1Q9WVL1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ap4s1Q9WVL1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ap4s1Q9WVL1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ap4s1Q9WVL1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ap4s1Q9WVL1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.46■□□□□ 0.87
Ap4s1Q9WVL1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ap4s1Q9WVL1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Ap4s1Q9WVL1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ap4s1Q9WVL1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ap4s1Q9WVL1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ap4s1Q9WVL1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ap4s1Q9WVL1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.42■□□□□ 0.86
Ap4s1Q9WVL1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ap4s1Q9WVL1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ap4s1Q9WVL1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ap4s1Q9WVL1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ap4s1Q9WVL1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ap4s1Q9WVL1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ap4s1Q9WVL1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ap4s1Q9WVL1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Ap4s1Q9WVL1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ap4s1Q9WVL1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ap4s1Q9WVL1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ap4s1Q9WVL1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ap4s1Q9WVL1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ap4s1Q9WVL1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ap4s1Q9WVL1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms