Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim39Q9ESN2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim39Q9ESN2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Trim39Q9ESN2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Trim39Q9ESN2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim39Q9ESN2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim39Q9ESN2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim39Q9ESN2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim39Q9ESN2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim39Q9ESN2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim39Q9ESN2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim39Q9ESN2 Gm27502-201ENSMUST00000183495 199 ntBASIC19.77■□□□□ 0.76
Trim39Q9ESN2 Mir6538-201ENSMUST00000183713 110 ntBASIC19.77■□□□□ 0.76
Trim39Q9ESN2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim39Q9ESN2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.77■□□□□ 0.75
Trim39Q9ESN2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim39Q9ESN2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.75■□□□□ 0.75
Trim39Q9ESN2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim39Q9ESN2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.73■□□□□ 0.75
Trim39Q9ESN2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim39Q9ESN2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trim39Q9ESN2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim39Q9ESN2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim39Q9ESN2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim39Q9ESN2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim39Q9ESN2 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms