Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf135Q9CWS1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf135Q9CWS1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf135Q9CWS1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Rnf135Q9CWS1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf135Q9CWS1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf135Q9CWS1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Rnf135Q9CWS1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.26■■□□□ 1.15
Rnf135Q9CWS1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.25■■□□□ 1.15
Rnf135Q9CWS1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Rnf135Q9CWS1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Rnf135Q9CWS1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Rnf135Q9CWS1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Rnf135Q9CWS1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.22■■□□□ 1.15
Rnf135Q9CWS1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rnf135Q9CWS1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.22■■□□□ 1.15
Rnf135Q9CWS1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Rnf135Q9CWS1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Rnf135Q9CWS1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf135Q9CWS1 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.21■■□□□ 1.15
Rnf135Q9CWS1 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Rnf135Q9CWS1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Rnf135Q9CWS1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Gm37415-201ENSMUST00000192265 2054 ntBASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.2■■□□□ 1.14
Rnf135Q9CWS1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf135Q9CWS1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Rnf135Q9CWS1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Rnf135Q9CWS1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Rnf135Q9CWS1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.18■■□□□ 1.14
Rnf135Q9CWS1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf135Q9CWS1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Rnf135Q9CWS1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf135Q9CWS1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf135Q9CWS1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rnf135Q9CWS1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf135Q9CWS1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf135Q9CWS1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf135Q9CWS1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.14■■□□□ 1.13
Rnf135Q9CWS1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf135Q9CWS1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf135Q9CWS1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf135Q9CWS1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms