Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhb3Q91XZ7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdhb3Q91XZ7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb3Q91XZ7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.27■■□□□ 1
Pcdhb3Q91XZ7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdhb3Q91XZ7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhb3Q91XZ7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhb3Q91XZ7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb3Q91XZ7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb3Q91XZ7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhb3Q91XZ7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhb3Q91XZ7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Golph3-202ENSMUST00000226517 2359 ntBASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhb3Q91XZ7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Pcdhb3Q91XZ7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb3Q91XZ7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb3Q91XZ7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhb3Q91XZ7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb3Q91XZ7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhb3Q91XZ7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb3Q91XZ7 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 Mir3960-201ENSMUST00000198213 73 ntBASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhb3Q91XZ7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb3Q91XZ7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdhb3Q91XZ7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdhb3Q91XZ7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb3Q91XZ7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb3Q91XZ7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhb3Q91XZ7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhb3Q91XZ7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb3Q91XZ7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhb3Q91XZ7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb3Q91XZ7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb3Q91XZ7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb3Q91XZ7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb3Q91XZ7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb3Q91XZ7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb3Q91XZ7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb3Q91XZ7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb3Q91XZ7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhb3Q91XZ7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.11■□□□□ 0.97
Pcdhb3Q91XZ7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms