Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps50Q8CI71 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps50Q8CI71 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.9■□□□□ 0.94
Vps50Q8CI71 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Vps50Q8CI71 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps50Q8CI71 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Vps50Q8CI71 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Vps50Q8CI71 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.89■□□□□ 0.93
Vps50Q8CI71 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Vps50Q8CI71 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.87■□□□□ 0.93
Vps50Q8CI71 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Vps50Q8CI71 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps50Q8CI71 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Vps50Q8CI71 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Vps50Q8CI71 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.85■□□□□ 0.93
Vps50Q8CI71 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps50Q8CI71 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps50Q8CI71 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps50Q8CI71 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Vps50Q8CI71 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.84■□□□□ 0.93
Vps50Q8CI71 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Vps50Q8CI71 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps50Q8CI71 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps50Q8CI71 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps50Q8CI71 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Vps50Q8CI71 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Vps50Q8CI71 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Vps50Q8CI71 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Vps50Q8CI71 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Vps50Q8CI71 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Vps50Q8CI71 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps50Q8CI71 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Vps50Q8CI71 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Vps50Q8CI71 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Vps50Q8CI71 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps50Q8CI71 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Vps50Q8CI71 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Vps50Q8CI71 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.81■□□□□ 0.92
Vps50Q8CI71 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Vps50Q8CI71 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.8■□□□□ 0.92
Vps50Q8CI71 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Vps50Q8CI71 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
Vps50Q8CI71 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Vps50Q8CI71 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Vps50Q8CI71 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.78■□□□□ 0.92
Vps50Q8CI71 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.78■□□□□ 0.92
Vps50Q8CI71 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Vps50Q8CI71 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps50Q8CI71 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps50Q8CI71 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Vps50Q8CI71 Gm5921-201ENSMUST00000075898 882 ntBASIC20.77■□□□□ 0.92
Vps50Q8CI71 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Vps50Q8CI71 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Vps50Q8CI71 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.77■□□□□ 0.91
Vps50Q8CI71 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Vps50Q8CI71 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms