Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc49a3Q8CE47 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc49a3Q8CE47 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc49a3Q8CE47 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc49a3Q8CE47 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc49a3Q8CE47 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc49a3Q8CE47 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc49a3Q8CE47 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc49a3Q8CE47 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc49a3Q8CE47 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Slc49a3Q8CE47 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Iqck-206ENSMUST00000208658 2891 ntBASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc49a3Q8CE47 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc49a3Q8CE47 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc49a3Q8CE47 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc49a3Q8CE47 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc49a3Q8CE47 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
Slc49a3Q8CE47 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc49a3Q8CE47 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc49a3Q8CE47 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc49a3Q8CE47 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc49a3Q8CE47 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc49a3Q8CE47 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.59■□□□□ 0.73
Slc49a3Q8CE47 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc49a3Q8CE47 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc49a3Q8CE47 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Slc49a3Q8CE47 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc49a3Q8CE47 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Slc49a3Q8CE47 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc49a3Q8CE47 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc49a3Q8CE47 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Slc49a3Q8CE47 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.57■□□□□ 0.72
Slc49a3Q8CE47 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc49a3Q8CE47 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc49a3Q8CE47 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Gm9812-201ENSMUST00000061934 968 ntBASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc49a3Q8CE47 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc49a3Q8CE47 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Slc49a3Q8CE47 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc49a3Q8CE47 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms