Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Aph1bQ8C7N7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Aph1bQ8C7N7 Gm11687-201ENSMUST00000118911 886 ntBASIC21.33■■□□□ 1.01
Aph1bQ8C7N7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Aph1bQ8C7N7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Aph1bQ8C7N7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Aph1bQ8C7N7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Aph1bQ8C7N7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Aph1bQ8C7N7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Aph1bQ8C7N7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.32■■□□□ 1
Aph1bQ8C7N7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Aph1bQ8C7N7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Aph1bQ8C7N7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.3■■□□□ 1
Aph1bQ8C7N7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Aph1bQ8C7N7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Aph1bQ8C7N7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.28■■□□□ 1
Aph1bQ8C7N7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.28■■□□□ 1
Aph1bQ8C7N7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Aph1bQ8C7N7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.27■■□□□ 1
Aph1bQ8C7N7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.27■■□□□ 1
Aph1bQ8C7N7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Aph1bQ8C7N7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.27■■□□□ 1
Aph1bQ8C7N7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Aph1bQ8C7N7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Aph1bQ8C7N7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Aph1bQ8C7N7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Aph1bQ8C7N7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Aph1bQ8C7N7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Aph1bQ8C7N7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Aph1bQ8C7N7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Aph1bQ8C7N7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Aph1bQ8C7N7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Aph1bQ8C7N7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Aph1bQ8C7N7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Aph1bQ8C7N7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Aph1bQ8C7N7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.24■□□□□ 0.99
Aph1bQ8C7N7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Aph1bQ8C7N7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Aph1bQ8C7N7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Aph1bQ8C7N7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Aph1bQ8C7N7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Aph1bQ8C7N7 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Aph1bQ8C7N7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Aph1bQ8C7N7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Aph1bQ8C7N7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
Aph1bQ8C7N7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.2■□□□□ 0.98
Aph1bQ8C7N7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Aph1bQ8C7N7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms