Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap54Q8C6S9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.02■□□□□ 0.95
Cfap54Q8C6S9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cfap54Q8C6S9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap54Q8C6S9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap54Q8C6S9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cfap54Q8C6S9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cfap54Q8C6S9 Gm2011-201ENSMUST00000203124 1263 ntBASIC21■□□□□ 0.95
Cfap54Q8C6S9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21■□□□□ 0.95
Cfap54Q8C6S9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap54Q8C6S9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap54Q8C6S9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap54Q8C6S9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap54Q8C6S9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap54Q8C6S9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap54Q8C6S9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap54Q8C6S9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap54Q8C6S9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cfap54Q8C6S9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap54Q8C6S9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap54Q8C6S9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap54Q8C6S9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap54Q8C6S9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.92■□□□□ 0.94
Cfap54Q8C6S9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap54Q8C6S9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cfap54Q8C6S9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfap54Q8C6S9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cfap54Q8C6S9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cfap54Q8C6S9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cfap54Q8C6S9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfap54Q8C6S9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfap54Q8C6S9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfap54Q8C6S9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfap54Q8C6S9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.88■□□□□ 0.93
Cfap54Q8C6S9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cfap54Q8C6S9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfap54Q8C6S9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms