Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Ptcd1Q8C2E4 Gm27454-201ENSMUST00000185090 204 ntBASIC26.6■■□□□ 1.85
Ptcd1Q8C2E4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ptcd1Q8C2E4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd1Q8C2E4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd1Q8C2E4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Ptcd1Q8C2E4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Ptcd1Q8C2E4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.57■■□□□ 1.84
Ptcd1Q8C2E4 Gm45417-201ENSMUST00000209533 758 ntBASIC26.57■■□□□ 1.84
Ptcd1Q8C2E4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ptcd1Q8C2E4 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.57■■□□□ 1.84
Ptcd1Q8C2E4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ptcd1Q8C2E4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptcd1Q8C2E4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ptcd1Q8C2E4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Ptcd1Q8C2E4 Il17rd-202ENSMUST00000223942 2186 ntBASIC26.54■■□□□ 1.84
Ptcd1Q8C2E4 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptcd1Q8C2E4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ptcd1Q8C2E4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ptcd1Q8C2E4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Ptcd1Q8C2E4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
Ptcd1Q8C2E4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ptcd1Q8C2E4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ptcd1Q8C2E4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Ptcd1Q8C2E4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd1Q8C2E4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd1Q8C2E4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd1Q8C2E4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ptcd1Q8C2E4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Ptcd1Q8C2E4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd1Q8C2E4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd1Q8C2E4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
Ptcd1Q8C2E4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd1Q8C2E4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ptcd1Q8C2E4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.49■■□□□ 1.83
Ptcd1Q8C2E4 Gm10399-202ENSMUST00000202768 748 ntBASIC26.49■■□□□ 1.83
Ptcd1Q8C2E4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.49■■□□□ 1.83
Ptcd1Q8C2E4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Ptcd1Q8C2E4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptcd1Q8C2E4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptcd1Q8C2E4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.47■■□□□ 1.83
Ptcd1Q8C2E4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ptcd1Q8C2E4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ptcd1Q8C2E4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Ptcd1Q8C2E4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd1Q8C2E4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd1Q8C2E4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd1Q8C2E4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ptcd1Q8C2E4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Ptcd1Q8C2E4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd1Q8C2E4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd1Q8C2E4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd1Q8C2E4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ptcd1Q8C2E4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptcd1Q8C2E4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptcd1Q8C2E4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ptcd1Q8C2E4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Ptcd1Q8C2E4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ptcd1Q8C2E4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms