Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Samm50Q8BGH2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.03■■□□□ 1.6
Samm50Q8BGH2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Samm50Q8BGH2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Samm50Q8BGH2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Samm50Q8BGH2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Samm50Q8BGH2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Samm50Q8BGH2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.02■■□□□ 1.6
Samm50Q8BGH2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Samm50Q8BGH2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Samm50Q8BGH2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Samm50Q8BGH2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Samm50Q8BGH2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Samm50Q8BGH2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Samm50Q8BGH2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Samm50Q8BGH2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25■■□□□ 1.59
Samm50Q8BGH2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Samm50Q8BGH2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC25■■□□□ 1.59
Samm50Q8BGH2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Samm50Q8BGH2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Samm50Q8BGH2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Samm50Q8BGH2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Samm50Q8BGH2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Samm50Q8BGH2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Samm50Q8BGH2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Samm50Q8BGH2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Samm50Q8BGH2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Samm50Q8BGH2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Samm50Q8BGH2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
Samm50Q8BGH2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Samm50Q8BGH2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Samm50Q8BGH2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Samm50Q8BGH2 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Samm50Q8BGH2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
Samm50Q8BGH2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.92■■□□□ 1.58
Samm50Q8BGH2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.92■■□□□ 1.58
Samm50Q8BGH2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Samm50Q8BGH2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Samm50Q8BGH2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Samm50Q8BGH2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Samm50Q8BGH2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Samm50Q8BGH2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Samm50Q8BGH2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Samm50Q8BGH2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Samm50Q8BGH2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.88■■□□□ 1.57
Samm50Q8BGH2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.88■■□□□ 1.57
Samm50Q8BGH2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Samm50Q8BGH2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Samm50Q8BGH2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Samm50Q8BGH2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Samm50Q8BGH2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.86■■□□□ 1.57
Samm50Q8BGH2 Gm22567-201ENSMUST00000175542 342 ntBASIC24.86■■□□□ 1.57
Samm50Q8BGH2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Samm50Q8BGH2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms