Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Sox21Q811W0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox21Q811W0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox21Q811W0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox21Q811W0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox21Q811W0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox21Q811W0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Sox21Q811W0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.47■□□□□ 0.39
Sox21Q811W0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sox21Q811W0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox21Q811W0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox21Q811W0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sox21Q811W0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Sox21Q811W0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox21Q811W0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox21Q811W0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sox21Q811W0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sox21Q811W0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox21Q811W0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.46■□□□□ 0.39
Sox21Q811W0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox21Q811W0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Sox21Q811W0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.46■□□□□ 0.39
Sox21Q811W0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox21Q811W0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox21Q811W0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox21Q811W0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox21Q811W0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.44■□□□□ 0.38
Sox21Q811W0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sox21Q811W0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sox21Q811W0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox21Q811W0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sox21Q811W0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
Sox21Q811W0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sox21Q811W0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sox21Q811W0 Etf1-202ENSMUST00000180351 108 ntBASIC17.42■□□□□ 0.38
Sox21Q811W0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sox21Q811W0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.42■□□□□ 0.38
Sox21Q811W0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.42■□□□□ 0.38
Sox21Q811W0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sox21Q811W0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sox21Q811W0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sox21Q811W0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sox21Q811W0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sox21Q811W0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sox21Q811W0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox21Q811W0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox21Q811W0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox21Q811W0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox21Q811W0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sox21Q811W0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox21Q811W0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox21Q811W0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sox21Q811W0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Sox21Q811W0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
Sox21Q811W0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sox21Q811W0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox21Q811W0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox21Q811W0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox21Q811W0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sox21Q811W0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.39■□□□□ 0.37
Sox21Q811W0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Sox21Q811W0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox21Q811W0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sox21Q811W0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox21Q811W0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox21Q811W0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.38■□□□□ 0.37
Sox21Q811W0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox21Q811W0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sox21Q811W0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sox21Q811W0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sox21Q811W0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 102.9 ms