Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Pcdh19Q80TF3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Etf1-202ENSMUST00000180351 108 ntBASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.08■□□□□ 0.97
Pcdh19Q80TF3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh19Q80TF3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh19Q80TF3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh19Q80TF3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh19Q80TF3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh19Q80TF3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh19Q80TF3 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.06■□□□□ 0.96
Pcdh19Q80TF3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh19Q80TF3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh19Q80TF3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh19Q80TF3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh19Q80TF3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh19Q80TF3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh19Q80TF3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh19Q80TF3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh19Q80TF3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.04■□□□□ 0.96
Pcdh19Q80TF3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh19Q80TF3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdh19Q80TF3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdh19Q80TF3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
Pcdh19Q80TF3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdh19Q80TF3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh19Q80TF3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdh19Q80TF3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdh19Q80TF3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdh19Q80TF3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdh19Q80TF3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh19Q80TF3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdh19Q80TF3 Gm7417-201ENSMUST00000192950 473 ntBASIC20.97■□□□□ 0.95
Pcdh19Q80TF3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdh19Q80TF3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdh19Q80TF3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdh19Q80TF3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.96■□□□□ 0.95
Pcdh19Q80TF3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh19Q80TF3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdh19Q80TF3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdh19Q80TF3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Pcdh19Q80TF3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh19Q80TF3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh19Q80TF3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdh19Q80TF3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms