Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC30.29■■■□□ 2.44
Gli3Q61602 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC30.29■■■□□ 2.44
Gli3Q61602 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC30.29■■■□□ 2.44
Gli3Q61602 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Gli3Q61602 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gli3Q61602 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC30.28■■■□□ 2.44
Gli3Q61602 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gli3Q61602 CT025689.6-201ENSMUST00000224991 1104 ntBASIC30.28■■■□□ 2.44
Gli3Q61602 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Gli3Q61602 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Gli3Q61602 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gli3Q61602 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gli3Q61602 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Gli3Q61602 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Gli3Q61602 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Gli3Q61602 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
Gli3Q61602 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC30.26■■■□□ 2.43
Gli3Q61602 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gli3Q61602 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gli3Q61602 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Gli3Q61602 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Gli3Q61602 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gli3Q61602 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gli3Q61602 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gli3Q61602 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Gli3Q61602 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Gli3Q61602 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Gli3Q61602 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
Gli3Q61602 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gli3Q61602 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Gli3Q61602 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Gli3Q61602 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Gli3Q61602 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC30.23■■■□□ 2.43
Gli3Q61602 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Gli3Q61602 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Gm27405-201ENSMUST00000184201 112 ntBASIC30.22■■■□□ 2.43
Gli3Q61602 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Gli3Q61602 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Gli3Q61602 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Gli3Q61602 Gm37179-201ENSMUST00000194862 823 ntBASIC30.2■■■□□ 2.43
Gli3Q61602 Gm43137-201ENSMUST00000198052 594 ntBASIC30.2■■■□□ 2.43
Gli3Q61602 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Gli3Q61602 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Gli3Q61602 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Gli3Q61602 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC30.2■■■□□ 2.43
Gli3Q61602 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.42
Gli3Q61602 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Gli3Q61602 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Gli3Q61602 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Gli3Q61602 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Gli3Q61602 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC30.17■■■□□ 2.42
Gli3Q61602 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC30.17■■■□□ 2.42
Gli3Q61602 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Gli3Q61602 Gm10849-201ENSMUST00000100397 618 ntBASIC30.16■■■□□ 2.42
Gli3Q61602 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Gli3Q61602 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC30.16■■■□□ 2.42
Gli3Q61602 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Gli3Q61602 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC30.16■■■□□ 2.42
Gli3Q61602 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Gli3Q61602 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Gli3Q61602 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC30.15■■■□□ 2.42
Gli3Q61602 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Gli3Q61602 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
Gli3Q61602 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.13■■■□□ 2.41
Gli3Q61602 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Gli3Q61602 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Gli3Q61602 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Gli3Q61602 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Gli3Q61602 Mir7075-201ENSMUST00000184187 82 ntBASIC30.11■■■□□ 2.41
Gli3Q61602 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.11■■■□□ 2.41
Gli3Q61602 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Gli3Q61602 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC30.11■■■□□ 2.41
Gli3Q61602 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Gli3Q61602 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Gli3Q61602 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Gli3Q61602 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Gli3Q61602 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Gli3Q61602 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Gli3Q61602 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
Gli3Q61602 Amer2-203ENSMUST00000225247 2662 ntBASIC30.09■■■□□ 2.41
Gli3Q61602 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Gli3Q61602 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Gli3Q61602 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC30.08■■■□□ 2.41
Gli3Q61602 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Gli3Q61602 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Gli3Q61602 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC30.07■■■□□ 2.4
Gli3Q61602 Gm42569-201ENSMUST00000200539 472 ntBASIC30.07■■■□□ 2.4
Gli3Q61602 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms