Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.1■□□□□ 0.81
Sox17Q61473 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox17Q61473 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.1■□□□□ 0.81
Sox17Q61473 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sox17Q61473 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox17Q61473 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox17Q61473 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sox17Q61473 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sox17Q61473 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.09■□□□□ 0.81
Sox17Q61473 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox17Q61473 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sox17Q61473 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Sox17Q61473 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox17Q61473 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sox17Q61473 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.08■□□□□ 0.81
Sox17Q61473 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox17Q61473 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sox17Q61473 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sox17Q61473 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Sox17Q61473 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
Sox17Q61473 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.06■□□□□ 0.8
Sox17Q61473 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sox17Q61473 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.05■□□□□ 0.8
Sox17Q61473 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
Sox17Q61473 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.05■□□□□ 0.8
Sox17Q61473 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sox17Q61473 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.05■□□□□ 0.8
Sox17Q61473 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Sox17Q61473 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sox17Q61473 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Sox17Q61473 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox17Q61473 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sox17Q61473 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sox17Q61473 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sox17Q61473 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sox17Q61473 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Sox17Q61473 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox17Q61473 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sox17Q61473 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.02■□□□□ 0.8
Sox17Q61473 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Sox17Q61473 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Sox17Q61473 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.01■□□□□ 0.79
Sox17Q61473 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 Terc-201ENSMUST00000082862 423 ntBASIC20.01■□□□□ 0.79
Sox17Q61473 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.01■□□□□ 0.79
Sox17Q61473 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Sox17Q61473 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Sox17Q61473 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sox17Q61473 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Gm45364-201ENSMUST00000210883 159 ntBASIC20■□□□□ 0.79
Sox17Q61473 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Sox17Q61473 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sox17Q61473 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Sox17Q61473 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Sox17Q61473 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox17Q61473 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox17Q61473 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox17Q61473 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Sox17Q61473 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sox17Q61473 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox17Q61473 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.99■□□□□ 0.79
Sox17Q61473 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sox17Q61473 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Mir3960-201ENSMUST00000198213 73 ntBASIC19.98■□□□□ 0.79
Sox17Q61473 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sox17Q61473 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sox17Q61473 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sox17Q61473 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.97■□□□□ 0.79
Sox17Q61473 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms