Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six4Q61321 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Six4Q61321 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.82■■□□□ 1.08
Six4Q61321 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Six4Q61321 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.82■■□□□ 1.08
Six4Q61321 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Six4Q61321 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.81■■□□□ 1.08
Six4Q61321 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Six4Q61321 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Six4Q61321 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Six4Q61321 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.8■■□□□ 1.08
Six4Q61321 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.8■■□□□ 1.08
Six4Q61321 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Six4Q61321 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Six4Q61321 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.79■■□□□ 1.08
Six4Q61321 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Six4Q61321 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.79■■□□□ 1.08
Six4Q61321 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six4Q61321 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six4Q61321 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Six4Q61321 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Six4Q61321 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Six4Q61321 Gm45444-201ENSMUST00000211394 898 ntBASIC21.78■■□□□ 1.08
Six4Q61321 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six4Q61321 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Six4Q61321 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Six4Q61321 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Six4Q61321 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.76■■□□□ 1.07
Six4Q61321 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.76■■□□□ 1.07
Six4Q61321 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.76■■□□□ 1.07
Six4Q61321 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six4Q61321 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
Six4Q61321 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six4Q61321 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six4Q61321 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Six4Q61321 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six4Q61321 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.75■■□□□ 1.07
Six4Q61321 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.75■■□□□ 1.07
Six4Q61321 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six4Q61321 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Six4Q61321 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Six4Q61321 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Six4Q61321 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six4Q61321 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Six4Q61321 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Six4Q61321 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six4Q61321 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six4Q61321 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Six4Q61321 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six4Q61321 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six4Q61321 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six4Q61321 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.72■■□□□ 1.07
Six4Q61321 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
Six4Q61321 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.72■■□□□ 1.07
Six4Q61321 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Six4Q61321 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Six4Q61321 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six4Q61321 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Six4Q61321 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Six4Q61321 Gm43566-201ENSMUST00000196851 808 ntBASIC21.71■■□□□ 1.07
Six4Q61321 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Six4Q61321 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Six4Q61321 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Six4Q61321 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six4Q61321 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six4Q61321 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six4Q61321 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Six4Q61321 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six4Q61321 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six4Q61321 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six4Q61321 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six4Q61321 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six4Q61321 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six4Q61321 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six4Q61321 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six4Q61321 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six4Q61321 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.66■■□□□ 1.06
Six4Q61321 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six4Q61321 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms