Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ptch1Q61115 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
Ptch1Q61115 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ptch1Q61115 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Ptch1Q61115 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC32.01■■■□□ 2.72
Ptch1Q61115 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
Ptch1Q61115 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Ptch1Q61115 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC32.01■■■□□ 2.72
Ptch1Q61115 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC32.01■■■□□ 2.72
Ptch1Q61115 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ptch1Q61115 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ptch1Q61115 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC32■■■□□ 2.71
Ptch1Q61115 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ptch1Q61115 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ptch1Q61115 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ptch1Q61115 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Ptch1Q61115 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ptch1Q61115 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC31.98■■■□□ 2.71
Ptch1Q61115 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
Ptch1Q61115 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC31.98■■■□□ 2.71
Ptch1Q61115 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ptch1Q61115 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ptch1Q61115 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC31.97■■■□□ 2.71
Ptch1Q61115 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ptch1Q61115 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
Ptch1Q61115 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC31.96■■■□□ 2.71
Ptch1Q61115 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ptch1Q61115 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ptch1Q61115 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC31.95■■■□□ 2.71
Ptch1Q61115 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.71
Ptch1Q61115 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
Ptch1Q61115 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ptch1Q61115 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
Ptch1Q61115 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ptch1Q61115 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Ptch1Q61115 Gm6139-201ENSMUST00000079261 882 ntBASIC31.94■■■□□ 2.7
Ptch1Q61115 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC31.93■■■□□ 2.7
Ptch1Q61115 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ptch1Q61115 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
Ptch1Q61115 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ptch1Q61115 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Ptch1Q61115 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.92■■■□□ 2.7
Ptch1Q61115 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ptch1Q61115 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
Ptch1Q61115 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ptch1Q61115 AC164629.5-201ENSMUST00000220387 632 ntBASIC31.91■■■□□ 2.7
Ptch1Q61115 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ptch1Q61115 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ptch1Q61115 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC31.9■■■□□ 2.7
Ptch1Q61115 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC31.9■■■□□ 2.7
Ptch1Q61115 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ptch1Q61115 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ptch1Q61115 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Ptch1Q61115 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ptch1Q61115 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ptch1Q61115 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ptch1Q61115 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ptch1Q61115 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ptch1Q61115 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Ptch1Q61115 Gm9207-201ENSMUST00000198773 1115 ntBASIC31.88■■■□□ 2.69
Ptch1Q61115 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ptch1Q61115 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ptch1Q61115 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
Ptch1Q61115 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC31.87■■■□□ 2.69
Ptch1Q61115 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ptch1Q61115 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ptch1Q61115 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Ptch1Q61115 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ptch1Q61115 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ptch1Q61115 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.85■■■□□ 2.69
Ptch1Q61115 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Ptch1Q61115 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC31.84■■■□□ 2.69
Ptch1Q61115 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ptch1Q61115 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ptch1Q61115 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ptch1Q61115 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC31.83■■■□□ 2.69
Ptch1Q61115 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC31.83■■■□□ 2.69
Ptch1Q61115 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.83■■■□□ 2.69
Ptch1Q61115 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.83■■■□□ 2.69
Ptch1Q61115 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
Ptch1Q61115 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ptch1Q61115 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Ptch1Q61115 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ptch1Q61115 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Ptch1Q61115 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ptch1Q61115 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ptch1Q61115 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ptch1Q61115 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ptch1Q61115 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ptch1Q61115 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ptch1Q61115 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ptch1Q61115 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ptch1Q61115 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ptch1Q61115 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC31.79■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms