Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cxcr4P70658 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcr4P70658 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Cxcr4P70658 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcr4P70658 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cxcr4P70658 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cxcr4P70658 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cxcr4P70658 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Cxcr4P70658 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cxcr4P70658 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cxcr4P70658 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
Cxcr4P70658 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcr4P70658 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cxcr4P70658 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.03■□□□□ 0.8
Cxcr4P70658 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cxcr4P70658 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.02■□□□□ 0.8
Cxcr4P70658 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cxcr4P70658 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cxcr4P70658 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcr4P70658 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cxcr4P70658 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcr4P70658 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.01■□□□□ 0.79
Cxcr4P70658 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Cxcr4P70658 Gm10420-201ENSMUST00000121713 882 ntBASIC20.01■□□□□ 0.79
Cxcr4P70658 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cxcr4P70658 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 Gm5067-201ENSMUST00000170449 1009 ntBASIC20■□□□□ 0.79
Cxcr4P70658 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Cxcr4P70658 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cxcr4P70658 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Cxcr4P70658 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcr4P70658 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcr4P70658 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cxcr4P70658 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.99■□□□□ 0.79
Cxcr4P70658 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcr4P70658 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.99■□□□□ 0.79
Cxcr4P70658 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cxcr4P70658 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cxcr4P70658 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcr4P70658 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcr4P70658 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcr4P70658 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cxcr4P70658 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcr4P70658 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cxcr4P70658 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcr4P70658 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.97■□□□□ 0.79
Cxcr4P70658 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcr4P70658 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcr4P70658 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.97■□□□□ 0.79
Cxcr4P70658 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcr4P70658 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cxcr4P70658 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.96■□□□□ 0.79
Cxcr4P70658 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.96■□□□□ 0.79
Cxcr4P70658 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cxcr4P70658 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cxcr4P70658 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cxcr4P70658 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.95■□□□□ 0.78
Cxcr4P70658 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cxcr4P70658 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcr4P70658 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cxcr4P70658 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
Cxcr4P70658 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcr4P70658 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Cxcr4P70658 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
Cxcr4P70658 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcr4P70658 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcr4P70658 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cxcr4P70658 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cxcr4P70658 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcr4P70658 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcr4P70658 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms