Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sssca1P56873 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sssca1P56873 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.28■□□□□ 0.36
Sssca1P56873 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.28■□□□□ 0.36
Sssca1P56873 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sssca1P56873 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sssca1P56873 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sssca1P56873 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sssca1P56873 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sssca1P56873 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sssca1P56873 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sssca1P56873 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sssca1P56873 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sssca1P56873 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Sssca1P56873 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sssca1P56873 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sssca1P56873 Gm11599-201ENSMUST00000118720 878 ntBASIC17.26■□□□□ 0.35
Sssca1P56873 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sssca1P56873 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
Sssca1P56873 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sssca1P56873 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sssca1P56873 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sssca1P56873 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.24■□□□□ 0.35
Sssca1P56873 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sssca1P56873 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sssca1P56873 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Sssca1P56873 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sssca1P56873 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.23■□□□□ 0.35
Sssca1P56873 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sssca1P56873 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sssca1P56873 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.23■□□□□ 0.35
Sssca1P56873 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sssca1P56873 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Sssca1P56873 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.22■□□□□ 0.35
Sssca1P56873 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Sssca1P56873 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.22■□□□□ 0.35
Sssca1P56873 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sssca1P56873 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sssca1P56873 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
Sssca1P56873 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sssca1P56873 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sssca1P56873 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sssca1P56873 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sssca1P56873 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
Sssca1P56873 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.21■□□□□ 0.35
Sssca1P56873 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sssca1P56873 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sssca1P56873 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.2■□□□□ 0.34
Sssca1P56873 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.2■□□□□ 0.34
Sssca1P56873 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sssca1P56873 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sssca1P56873 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sssca1P56873 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sssca1P56873 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sssca1P56873 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sssca1P56873 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Sssca1P56873 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.19■□□□□ 0.34
Sssca1P56873 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sssca1P56873 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sssca1P56873 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.19■□□□□ 0.34
Sssca1P56873 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sssca1P56873 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sssca1P56873 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sssca1P56873 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sssca1P56873 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sssca1P56873 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sssca1P56873 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sssca1P56873 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Sssca1P56873 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sssca1P56873 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 1063.1 ms