Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Atxn1P54254 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Atxn1P54254 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Atxn1P54254 Gm18284-201ENSMUST00000172604 624 ntBASIC21.25■□□□□ 0.99
Atxn1P54254 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atxn1P54254 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Atxn1P54254 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Atxn1P54254 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Atxn1P54254 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Atxn1P54254 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atxn1P54254 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atxn1P54254 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.24■□□□□ 0.99
Atxn1P54254 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atxn1P54254 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Atxn1P54254 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Atxn1P54254 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atxn1P54254 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.23■□□□□ 0.99
Atxn1P54254 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Atxn1P54254 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atxn1P54254 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Atxn1P54254 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atxn1P54254 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Atxn1P54254 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Atxn1P54254 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Atxn1P54254 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Atxn1P54254 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Atxn1P54254 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atxn1P54254 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Atxn1P54254 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.2■□□□□ 0.98
Atxn1P54254 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atxn1P54254 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Atxn1P54254 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Atxn1P54254 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.18■□□□□ 0.98
Atxn1P54254 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.18■□□□□ 0.98
Atxn1P54254 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Atxn1P54254 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Atxn1P54254 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Atxn1P54254 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn1P54254 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn1P54254 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.17■□□□□ 0.98
Atxn1P54254 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.17■□□□□ 0.98
Atxn1P54254 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.17■□□□□ 0.98
Atxn1P54254 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Atxn1P54254 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn1P54254 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn1P54254 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Atxn1P54254 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.16■□□□□ 0.98
Atxn1P54254 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.16■□□□□ 0.98
Atxn1P54254 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Atxn1P54254 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.15■□□□□ 0.98
Atxn1P54254 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Atxn1P54254 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn1P54254 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn1P54254 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Atxn1P54254 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Atxn1P54254 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Atxn1P54254 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.14■□□□□ 0.97
Atxn1P54254 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Atxn1P54254 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.13■□□□□ 0.97
Atxn1P54254 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.13■□□□□ 0.97
Atxn1P54254 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.13■□□□□ 0.97
Atxn1P54254 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Atxn1P54254 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn1P54254 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atxn1P54254 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn1P54254 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Atxn1P54254 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.12■□□□□ 0.97
Atxn1P54254 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.12■□□□□ 0.97
Atxn1P54254 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn1P54254 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.12■□□□□ 0.97
Atxn1P54254 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.12■□□□□ 0.97
Atxn1P54254 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn1P54254 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms