Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cdh4P39038 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cdh4P39038 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh4P39038 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.48■□□□□ 0.87
Cdh4P39038 Gm13238-201ENSMUST00000117655 780 ntBASIC20.48■□□□□ 0.87
Cdh4P39038 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh4P39038 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cdh4P39038 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh4P39038 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.47■□□□□ 0.87
Cdh4P39038 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cdh4P39038 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cdh4P39038 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh4P39038 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cdh4P39038 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cdh4P39038 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh4P39038 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh4P39038 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Cdh4P39038 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cdh4P39038 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh4P39038 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh4P39038 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh4P39038 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cdh4P39038 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh4P39038 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.44■□□□□ 0.86
Cdh4P39038 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.44■□□□□ 0.86
Cdh4P39038 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Cdh4P39038 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Cdh4P39038 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cdh4P39038 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cdh4P39038 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Cdh4P39038 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh4P39038 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh4P39038 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdh4P39038 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh4P39038 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh4P39038 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cdh4P39038 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.42■□□□□ 0.86
Cdh4P39038 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cdh4P39038 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cdh4P39038 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh4P39038 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh4P39038 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cdh4P39038 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh4P39038 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
Cdh4P39038 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.4■□□□□ 0.86
Cdh4P39038 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh4P39038 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.4■□□□□ 0.86
Cdh4P39038 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh4P39038 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdh4P39038 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.39■□□□□ 0.85
Cdh4P39038 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh4P39038 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdh4P39038 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh4P39038 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh4P39038 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh4P39038 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh4P39038 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdh4P39038 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdh4P39038 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cdh4P39038 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cdh4P39038 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh4P39038 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.37■□□□□ 0.85
Cdh4P39038 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
Cdh4P39038 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh4P39038 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.36■□□□□ 0.85
Cdh4P39038 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cdh4P39038 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh4P39038 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.36■□□□□ 0.85
Cdh4P39038 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh4P39038 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh4P39038 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.35■□□□□ 0.85
Cdh4P39038 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms