Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nedd8P29595 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Nedd8P29595 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nedd8P29595 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nedd8P29595 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Nedd8P29595 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nedd8P29595 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.84■□□□□ 0.77
Nedd8P29595 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nedd8P29595 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.84■□□□□ 0.77
Nedd8P29595 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nedd8P29595 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.83■□□□□ 0.76
Nedd8P29595 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nedd8P29595 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Nedd8P29595 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Nedd8P29595 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nedd8P29595 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Nedd8P29595 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Nedd8P29595 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Nedd8P29595 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Nedd8P29595 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.81■□□□□ 0.76
Nedd8P29595 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nedd8P29595 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nedd8P29595 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Nedd8P29595 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nedd8P29595 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nedd8P29595 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.8■□□□□ 0.76
Nedd8P29595 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Nedd8P29595 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.79■□□□□ 0.76
Nedd8P29595 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nedd8P29595 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.79■□□□□ 0.76
Nedd8P29595 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nedd8P29595 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nedd8P29595 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nedd8P29595 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nedd8P29595 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nedd8P29595 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.75■□□□□ 0.75
Nedd8P29595 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nedd8P29595 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nedd8P29595 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nedd8P29595 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.75■□□□□ 0.75
Nedd8P29595 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nedd8P29595 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nedd8P29595 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.74■□□□□ 0.75
Nedd8P29595 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Nedd8P29595 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nedd8P29595 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nedd8P29595 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Gm22567-201ENSMUST00000175542 342 ntBASIC19.73■□□□□ 0.75
Nedd8P29595 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nedd8P29595 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nedd8P29595 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.72■□□□□ 0.75
Nedd8P29595 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nedd8P29595 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nedd8P29595 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nedd8P29595 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms