Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a2P08122 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Col4a2P08122 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col4a2P08122 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col4a2P08122 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.45■□□□□ 0.86
Col4a2P08122 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a2P08122 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.44■□□□□ 0.86
Col4a2P08122 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a2P08122 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a2P08122 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a2P08122 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.44■□□□□ 0.86
Col4a2P08122 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Col4a2P08122 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.44■□□□□ 0.86
Col4a2P08122 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Col4a2P08122 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Col4a2P08122 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Col4a2P08122 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.42■□□□□ 0.86
Col4a2P08122 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Col4a2P08122 Gm10399-202ENSMUST00000202768 748 ntBASIC20.41■□□□□ 0.86
Col4a2P08122 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a2P08122 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a2P08122 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Col4a2P08122 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a2P08122 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a2P08122 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.41■□□□□ 0.86
Col4a2P08122 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Col4a2P08122 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a2P08122 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.4■□□□□ 0.86
Col4a2P08122 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a2P08122 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col4a2P08122 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Col4a2P08122 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.4■□□□□ 0.86
Col4a2P08122 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a2P08122 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a2P08122 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a2P08122 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a2P08122 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a2P08122 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a2P08122 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a2P08122 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.39■□□□□ 0.85
Col4a2P08122 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a2P08122 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a2P08122 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a2P08122 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.38■□□□□ 0.85
Col4a2P08122 Serp2-204ENSMUST00000228055 705 ntBASIC20.38■□□□□ 0.85
Col4a2P08122 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a2P08122 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.38■□□□□ 0.85
Col4a2P08122 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a2P08122 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.37■□□□□ 0.85
Col4a2P08122 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a2P08122 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.37■□□□□ 0.85
Col4a2P08122 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Col4a2P08122 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a2P08122 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a2P08122 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a2P08122 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a2P08122 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.36■□□□□ 0.85
Col4a2P08122 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.36■□□□□ 0.85
Col4a2P08122 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a2P08122 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a2P08122 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.36■□□□□ 0.85
Col4a2P08122 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.36■□□□□ 0.85
Col4a2P08122 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a2P08122 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Col4a2P08122 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a2P08122 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a2P08122 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a2P08122 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a2P08122 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.35■□□□□ 0.85
Col4a2P08122 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a2P08122 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a2P08122 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a2P08122 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a2P08122 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a2P08122 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a2P08122 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a2P08122 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms