Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hcn3O88705 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hcn3O88705 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn3O88705 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Hcn3O88705 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn3O88705 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.46■□□□□ 0.87
Hcn3O88705 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.46■□□□□ 0.87
Hcn3O88705 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.46■□□□□ 0.87
Hcn3O88705 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hcn3O88705 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn3O88705 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn3O88705 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hcn3O88705 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.44■□□□□ 0.86
Hcn3O88705 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Hcn3O88705 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.44■□□□□ 0.86
Hcn3O88705 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Hcn3O88705 Gm4799-201ENSMUST00000095396 657 ntBASIC20.44■□□□□ 0.86
Hcn3O88705 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hcn3O88705 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hcn3O88705 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.43■□□□□ 0.86
Hcn3O88705 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.43■□□□□ 0.86
Hcn3O88705 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hcn3O88705 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Hcn3O88705 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.42■□□□□ 0.86
Hcn3O88705 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Hcn3O88705 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hcn3O88705 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn3O88705 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hcn3O88705 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn3O88705 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Hcn3O88705 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Hcn3O88705 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.41■□□□□ 0.86
Hcn3O88705 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn3O88705 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn3O88705 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hcn3O88705 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.4■□□□□ 0.86
Hcn3O88705 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn3O88705 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn3O88705 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Hcn3O88705 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn3O88705 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Hcn3O88705 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hcn3O88705 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hcn3O88705 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hcn3O88705 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.39■□□□□ 0.85
Hcn3O88705 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.39■□□□□ 0.85
Hcn3O88705 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hcn3O88705 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn3O88705 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn3O88705 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn3O88705 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Hcn3O88705 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hcn3O88705 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.37■□□□□ 0.85
Hcn3O88705 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hcn3O88705 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hcn3O88705 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hcn3O88705 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hcn3O88705 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.36■□□□□ 0.85
Hcn3O88705 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hcn3O88705 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.35■□□□□ 0.85
Hcn3O88705 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.35■□□□□ 0.85
Hcn3O88705 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.35■□□□□ 0.85
Hcn3O88705 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hcn3O88705 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn3O88705 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.34■□□□□ 0.85
Hcn3O88705 Mir3960-201ENSMUST00000198213 73 ntBASIC20.34■□□□□ 0.85
Hcn3O88705 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn3O88705 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hcn3O88705 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Hcn3O88705 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Hcn3O88705 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms