Protein–RNA interactions for Protein: O88574

Sap30, Histone deacetylase complex subunit SAP30, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sap30O88574 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sap30O88574 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sap30O88574 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.48■□□□□ 0.23
Sap30O88574 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Gm13238-201ENSMUST00000117655 780 ntBASIC16.47■□□□□ 0.23
Sap30O88574 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sap30O88574 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Sap30O88574 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sap30O88574 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Sap30O88574 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sap30O88574 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sap30O88574 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Sap30O88574 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.46■□□□□ 0.23
Sap30O88574 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sap30O88574 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Sap30O88574 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sap30O88574 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sap30O88574 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sap30O88574 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sap30O88574 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sap30O88574 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sap30O88574 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sap30O88574 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sap30O88574 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sap30O88574 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.44■□□□□ 0.22
Sap30O88574 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sap30O88574 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.44■□□□□ 0.22
Sap30O88574 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.44■□□□□ 0.22
Sap30O88574 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.44■□□□□ 0.22
Sap30O88574 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Sap30O88574 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sap30O88574 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sap30O88574 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sap30O88574 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.43■□□□□ 0.22
Sap30O88574 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sap30O88574 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sap30O88574 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sap30O88574 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sap30O88574 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.42■□□□□ 0.22
Sap30O88574 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sap30O88574 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sap30O88574 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.42■□□□□ 0.22
Sap30O88574 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sap30O88574 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sap30O88574 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
Sap30O88574 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.41■□□□□ 0.22
Sap30O88574 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.41■□□□□ 0.22
Sap30O88574 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sap30O88574 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.4■□□□□ 0.22
Sap30O88574 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sap30O88574 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.39■□□□□ 0.21
Sap30O88574 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sap30O88574 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sap30O88574 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sap30O88574 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sap30O88574 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sap30O88574 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sap30O88574 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Sap30O88574 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sap30O88574 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sap30O88574 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sap30O88574 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sap30O88574 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.38■□□□□ 0.21
Sap30O88574 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sap30O88574 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms