Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Gm11687-201ENSMUST00000118911 886 ntBASIC19.68■□□□□ 0.74
Capns1O88456 Gm9806-201ENSMUST00000051080 552 ntBASIC19.68■□□□□ 0.74
Capns1O88456 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capns1O88456 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.67■□□□□ 0.74
Capns1O88456 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Capns1O88456 Gm15039-201ENSMUST00000118914 875 ntBASIC19.67■□□□□ 0.74
Capns1O88456 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capns1O88456 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Capns1O88456 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Capns1O88456 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.67■□□□□ 0.74
Capns1O88456 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Capns1O88456 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Capns1O88456 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Capns1O88456 Gm4799-201ENSMUST00000095396 657 ntBASIC19.66■□□□□ 0.74
Capns1O88456 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capns1O88456 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.66■□□□□ 0.74
Capns1O88456 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Capns1O88456 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.66■□□□□ 0.74
Capns1O88456 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Capns1O88456 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Capns1O88456 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Capns1O88456 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Capns1O88456 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.65■□□□□ 0.74
Capns1O88456 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.64■□□□□ 0.73
Capns1O88456 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.64■□□□□ 0.73
Capns1O88456 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.64■□□□□ 0.73
Capns1O88456 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
Capns1O88456 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.64■□□□□ 0.73
Capns1O88456 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Capns1O88456 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Capns1O88456 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Capns1O88456 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Capns1O88456 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.63■□□□□ 0.73
Capns1O88456 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Capns1O88456 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capns1O88456 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Capns1O88456 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.62■□□□□ 0.73
Capns1O88456 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Capns1O88456 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Capns1O88456 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Capns1O88456 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Capns1O88456 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.61■□□□□ 0.73
Capns1O88456 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Capns1O88456 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.6■□□□□ 0.73
Capns1O88456 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.6■□□□□ 0.73
Capns1O88456 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Capns1O88456 Gm16437-201ENSMUST00000025669 507 ntBASIC19.6■□□□□ 0.73
Capns1O88456 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Capns1O88456 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.59■□□□□ 0.73
Capns1O88456 Gm22567-201ENSMUST00000175542 342 ntBASIC19.59■□□□□ 0.73
Capns1O88456 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.59■□□□□ 0.73
Capns1O88456 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Capns1O88456 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.58■□□□□ 0.73
Capns1O88456 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Capns1O88456 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Capns1O88456 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Capns1O88456 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.58■□□□□ 0.72
Capns1O88456 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Capns1O88456 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Capns1O88456 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Capns1O88456 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Capns1O88456 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Capns1O88456 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.57■□□□□ 0.72
Capns1O88456 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Capns1O88456 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.57■□□□□ 0.72
Capns1O88456 Gm7332-201ENSMUST00000118351 454 ntBASIC19.57■□□□□ 0.72
Capns1O88456 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Capns1O88456 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Capns1O88456 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.56■□□□□ 0.72
Capns1O88456 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.56■□□□□ 0.72
Capns1O88456 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.56■□□□□ 0.72
Capns1O88456 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Capns1O88456 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Capns1O88456 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Capns1O88456 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capns1O88456 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.55■□□□□ 0.72
Capns1O88456 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Capns1O88456 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.55■□□□□ 0.72
Capns1O88456 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms