Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim1O70400 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim1O70400 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Pdlim1O70400 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim1O70400 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim1O70400 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim1O70400 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdlim1O70400 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim1O70400 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim1O70400 Gm13238-201ENSMUST00000117655 780 ntBASIC21.25■□□□□ 0.99
Pdlim1O70400 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim1O70400 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim1O70400 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.25■□□□□ 0.99
Pdlim1O70400 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim1O70400 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim1O70400 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim1O70400 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim1O70400 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.24■□□□□ 0.99
Pdlim1O70400 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim1O70400 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim1O70400 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim1O70400 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.22■□□□□ 0.99
Pdlim1O70400 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim1O70400 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pdlim1O70400 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.22■□□□□ 0.99
Pdlim1O70400 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pdlim1O70400 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim1O70400 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Pdlim1O70400 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim1O70400 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim1O70400 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim1O70400 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.2■□□□□ 0.98
Pdlim1O70400 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.2■□□□□ 0.98
Pdlim1O70400 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Pdlim1O70400 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim1O70400 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim1O70400 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim1O70400 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Pdlim1O70400 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.19■□□□□ 0.98
Pdlim1O70400 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim1O70400 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Pdlim1O70400 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim1O70400 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim1O70400 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pdlim1O70400 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim1O70400 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim1O70400 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.17■□□□□ 0.98
Pdlim1O70400 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.17■□□□□ 0.98
Pdlim1O70400 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pdlim1O70400 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim1O70400 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim1O70400 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pdlim1O70400 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.16■□□□□ 0.98
Pdlim1O70400 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.16■□□□□ 0.98
Pdlim1O70400 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pdlim1O70400 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.15■□□□□ 0.98
Pdlim1O70400 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim1O70400 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim1O70400 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim1O70400 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Pdlim1O70400 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
Pdlim1O70400 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.15■□□□□ 0.98
Pdlim1O70400 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim1O70400 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim1O70400 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pdlim1O70400 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pdlim1O70400 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim1O70400 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pdlim1O70400 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Pdlim1O70400 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pdlim1O70400 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pdlim1O70400 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.13■□□□□ 0.97
Pdlim1O70400 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.13■□□□□ 0.97
Pdlim1O70400 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim1O70400 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.13■□□□□ 0.97
Pdlim1O70400 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.13■□□□□ 0.97
Pdlim1O70400 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Pdlim1O70400 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim1O70400 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pdlim1O70400 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Pdlim1O70400 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pdlim1O70400 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pdlim1O70400 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pdlim1O70400 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pdlim1O70400 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms