Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24■■□□□ 1.43
Prom1O54990 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24■■□□□ 1.43
Prom1O54990 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Prom1O54990 Gm43034-201ENSMUST00000198678 1364 ntBASIC24■■□□□ 1.43
Prom1O54990 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.99■■□□□ 1.43
Prom1O54990 Gm9847-201ENSMUST00000052528 599 ntBASIC23.99■■□□□ 1.43
Prom1O54990 Gm13241-201ENSMUST00000094493 780 ntBASIC23.99■■□□□ 1.43
Prom1O54990 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prom1O54990 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Prom1O54990 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Prom1O54990 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prom1O54990 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC23.98■■□□□ 1.43
Prom1O54990 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prom1O54990 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Prom1O54990 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prom1O54990 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Prom1O54990 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Prom1O54990 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.96■■□□□ 1.43
Prom1O54990 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Prom1O54990 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Prom1O54990 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Prom1O54990 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.96■■□□□ 1.43
Prom1O54990 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.96■■□□□ 1.43
Prom1O54990 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prom1O54990 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Prom1O54990 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.43
Prom1O54990 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23.95■■□□□ 1.42
Prom1O54990 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prom1O54990 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Prom1O54990 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.95■■□□□ 1.42
Prom1O54990 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Prom1O54990 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prom1O54990 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prom1O54990 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Prom1O54990 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Prom1O54990 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.93■■□□□ 1.42
Prom1O54990 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Prom1O54990 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prom1O54990 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.92■■□□□ 1.42
Prom1O54990 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prom1O54990 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Prom1O54990 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Prom1O54990 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.91■■□□□ 1.42
Prom1O54990 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Prom1O54990 Gm10399-202ENSMUST00000202768 748 ntBASIC23.9■■□□□ 1.42
Prom1O54990 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Prom1O54990 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Prom1O54990 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Prom1O54990 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
Prom1O54990 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Prom1O54990 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Prom1O54990 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Prom1O54990 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prom1O54990 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Prom1O54990 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prom1O54990 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prom1O54990 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Prom1O54990 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Prom1O54990 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.87■■□□□ 1.41
Prom1O54990 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Prom1O54990 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Prom1O54990 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Prom1O54990 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.85■■□□□ 1.41
Prom1O54990 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Prom1O54990 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.85■■□□□ 1.41
Prom1O54990 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.85■■□□□ 1.41
Prom1O54990 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Prom1O54990 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Prom1O54990 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prom1O54990 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Prom1O54990 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Prom1O54990 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prom1O54990 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Prom1O54990 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Prom1O54990 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.83■■□□□ 1.41
Prom1O54990 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.83■■□□□ 1.41
Prom1O54990 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
Prom1O54990 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC23.83■■□□□ 1.4
Prom1O54990 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Prom1O54990 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.82■■□□□ 1.4
Prom1O54990 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC23.82■■□□□ 1.4
Prom1O54990 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC23.82■■□□□ 1.4
Prom1O54990 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.82■■□□□ 1.4
Prom1O54990 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Prom1O54990 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Prom1O54990 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Prom1O54990 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC23.81■■□□□ 1.4
Prom1O54990 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Prom1O54990 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms