Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Rnf13O54965 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf13O54965 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf13O54965 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Rnf13O54965 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.39■□□□□ 0.69
Rnf13O54965 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.39■□□□□ 0.69
Rnf13O54965 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf13O54965 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf13O54965 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf13O54965 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf13O54965 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.38■□□□□ 0.69
Rnf13O54965 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf13O54965 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf13O54965 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf13O54965 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf13O54965 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf13O54965 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf13O54965 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf13O54965 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.37■□□□□ 0.69
Rnf13O54965 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf13O54965 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf13O54965 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf13O54965 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf13O54965 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf13O54965 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Rnf13O54965 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf13O54965 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.36■□□□□ 0.69
Rnf13O54965 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf13O54965 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf13O54965 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf13O54965 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf13O54965 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf13O54965 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rnf13O54965 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf13O54965 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf13O54965 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf13O54965 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf13O54965 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.35■□□□□ 0.69
Rnf13O54965 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.35■□□□□ 0.69
Rnf13O54965 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf13O54965 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf13O54965 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf13O54965 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf13O54965 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf13O54965 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf13O54965 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Rnf13O54965 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf13O54965 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf13O54965 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.32■□□□□ 0.68
Rnf13O54965 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf13O54965 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf13O54965 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf13O54965 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf13O54965 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf13O54965 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf13O54965 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf13O54965 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Rnf13O54965 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rnf13O54965 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.3■□□□□ 0.68
Rnf13O54965 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Rnf13O54965 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf13O54965 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf13O54965 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rnf13O54965 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rnf13O54965 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf13O54965 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf13O54965 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rnf13O54965 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rnf13O54965 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.28■□□□□ 0.68
Rnf13O54965 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf13O54965 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf13O54965 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf13O54965 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf13O54965 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf13O54965 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rnf13O54965 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rnf13O54965 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf13O54965 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.27■□□□□ 0.68
Rnf13O54965 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf13O54965 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Rnf13O54965 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rnf13O54965 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms