Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lhx8O35652 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx8O35652 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx8O35652 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lhx8O35652 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx8O35652 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx8O35652 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.58■□□□□ 0.89
Lhx8O35652 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Lhx8O35652 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lhx8O35652 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx8O35652 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx8O35652 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx8O35652 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lhx8O35652 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.57■□□□□ 0.88
Lhx8O35652 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx8O35652 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Lhx8O35652 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx8O35652 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Lhx8O35652 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx8O35652 Terc-201ENSMUST00000082862 423 ntBASIC20.57■□□□□ 0.88
Lhx8O35652 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lhx8O35652 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lhx8O35652 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx8O35652 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
Lhx8O35652 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx8O35652 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.56■□□□□ 0.88
Lhx8O35652 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lhx8O35652 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.56■□□□□ 0.88
Lhx8O35652 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lhx8O35652 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Lhx8O35652 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx8O35652 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Lhx8O35652 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Lhx8O35652 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lhx8O35652 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.54■□□□□ 0.88
Lhx8O35652 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Lhx8O35652 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lhx8O35652 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx8O35652 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx8O35652 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx8O35652 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx8O35652 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Lhx8O35652 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Lhx8O35652 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.53■□□□□ 0.88
Lhx8O35652 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx8O35652 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.52■□□□□ 0.88
Lhx8O35652 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx8O35652 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Lhx8O35652 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.52■□□□□ 0.88
Lhx8O35652 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.52■□□□□ 0.88
Lhx8O35652 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx8O35652 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Lhx8O35652 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Lhx8O35652 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx8O35652 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Lhx8O35652 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx8O35652 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx8O35652 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.51■□□□□ 0.87
Lhx8O35652 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.51■□□□□ 0.87
Lhx8O35652 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.51■□□□□ 0.87
Lhx8O35652 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx8O35652 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lhx8O35652 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx8O35652 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx8O35652 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lhx8O35652 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx8O35652 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx8O35652 Gm45444-201ENSMUST00000211394 898 ntBASIC20.49■□□□□ 0.87
Lhx8O35652 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx8O35652 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.49■□□□□ 0.87
Lhx8O35652 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lhx8O35652 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.48■□□□□ 0.87
Lhx8O35652 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lhx8O35652 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Lhx8O35652 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Lhx8O35652 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx8O35652 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.47■□□□□ 0.87
Lhx8O35652 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx8O35652 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx8O35652 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.47■□□□□ 0.87
Lhx8O35652 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lhx8O35652 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx8O35652 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx8O35652 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Lhx8O35652 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx8O35652 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lhx8O35652 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lhx8O35652 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lhx8O35652 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.45■□□□□ 0.86
Lhx8O35652 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms